Microbiome meta-analysis and cross-disease comparison enabled by the SIAMCAT machine learning toolbox
Genome Biol. 2021 Mar 30;22(1):93. doi: 10.1186/s13059-021-02306-1. PMID: 33785070 Free PMC article.
The human microbiome is increasingly mined for diagnostic and therapeutic biomarkers using machine learning (ML). …We demonstrate its capabilities in a meta–analysis of fecal metagenomic studies (10,803 samples). When naively transferred across studies, ML …