Metaproteomic sample preparation methods bias the recovery of host and microbial proteins according to taxa and cellular compartment

Gavin PG, Wong J, Loo D, Zipris D, Hill MM, Hamilton-Williams EE. J
Proteomics. 2021 Apr 5;240:104219. doi: 10.1016/j.jprot.2021.104219. Online ahead of print. PMID: 33831598
SIGNIFICANCE: We compared how different stool protein preparation methods influenced the taxonomic and functional characteristics of microbial and host proteins identified. …However, the taxonomic and subcellular origin of the microbial proteins differed considera …